Browse of TCMCG051C06646 protein

CDS

Accession Number	TCMCG051C06646
gbkey	CDS
Protein Id	XP_002300852.1
Location	join(3585336..3585869,3586027..3586307,3586725..3586807,3586907..3587310,3587749..3587942,3588047..3588227,3588392..3588516,3588697..3588786,3589153..3589231,3589352..3589428,3589640..3589748,3590249..3590368)
Gene	LOC7480701
GeneID	7480701
Organism	Populus trichocarpa

Protein

Length	758aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_002300816.3
Definition	general transcription and DNA repair factor IIH helicase subunit XPD isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	L
Description	DNA repair helicase
KEGG_TC	-
KEGG_Module	M00290        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K10844        [VIEW IN KEGG]
EC	3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko03022        [VIEW IN KEGG] ko03420        [VIEW IN KEGG] map03022        [VIEW IN KEGG] map03420        [VIEW IN KEGG]
GOs	GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009408        [VIEW IN EMBL-EBI] GO:0009411        [VIEW IN EMBL-EBI] GO:0009416        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAGTTTCAAATCGAGGACGTGACCGTATACTTCCCGTACGATCACATATACCCGGAGCAATACTCCTACATGGTGGAGCTAAAGCGTGCACTAGACGCTAAAGGTCACTGCCTGCTTGAAATGCCTACAGGAACGGGAAAGACAATAGCTTTACTATCATTAATCACAAGCTACACTATCTCTAAACCTCAAGGCGCAATCAAGCTAATTTACTGCACTCGCACAGTTCACGAGATGGAGAAAACCCTAGCCGAATTGAAGTTATTGCATAATTATCAAGTCAAGCACCTCGGCCCTGCTGCCAAGATTTTGGCGATTGGATTGTCTTCGAGGAAGAATTTGTGTGTAAATCCTAATGTTTTGGAAGCGAATAATAGGGATTCGGTTGATGCTGCGTGTCGGAAAAGGACTGCGAGTTGGGTTAGGGCTTTGGCCGCGGAGAATCCGAATGTCGAGACTTGTGAGTTTTTTGAAAATTACGAGAGGGCTGCTTCTGGTGCTGTTTTGCCTCCTGGGGTTTATACTCTTCAGGATCTAAGGGCATATGGGAAAGAGAAAGGGTGGTGTCCATATTTTTTGGCAAGGCATATGGTGCAGCTTGCGAATGTAGTGGTTTATAGTTACCAATACTTGCTTGATCCGAAGGTGGCTGGGATTATATCCAAGGAAATGCAGAAGGAATCTGTTGTTGTGTTTGACGAGGCGCATAATATCGATAATGTATGTATTGAAGCACTTAGTGTTAGTGTGAGGAGGCAAACACTTGATGGAGCATCAAGAAATATCTCAAGGATTGAACAAGAGATTAACAGGTTCAAGGCCACTGATGCTAATAGACTGCGTGATGAGTACAAGCGGCTTGTTAATGGTTTGGCATTAAGTGGAAACTTACCTGGCTCAGATTCCTGGCTTTCAAATCCTGCCTTGCCTGATGATATTCTGAGGGAAGCAGTTCCTGGAAATATTCGCCGGGCAGAACATTTTTTGCATGTTTTACGAAGATTGCTCCAGTATCTAACAGTGCGGTTGGATACTGAGAATGTTGAGAAGGAAAGCCCTATTAGCTTTGTTGCCTCCATAAACAACCAAGCTGGAATCGACCAGAAAACACTAAAGTTTTGTTATGATCGCCTACATTCACTTATGTTGACGTTGGAAATAACTGATACAGATGAGTTCTTGCATGTCCAAACAATATGTGACTTTGCAACACTAGTGGGGACATATTCTCGTGGATTTTCCATCATAATTGAACCTTTTGATGAGAGAATGCCACATATTCCTGACCCTGTATTACAGCTCAGTTGCCATGATGCTTCTCTTGCCATAAAGCCCGTGTTTGACCGGTTTCAGTCAGTCGTAATTACATCTGGAACTCTAAGCCCAATTGATCTCTATCCTCGACTTCTTAATTTCCACCCTGTTGTCAGTCGAAGCTTTAAGATGTCCTTGACAAGAGATTGCATATGTCCAATGGTTCTCACTCGTGGAAGTGATCAACTTCCAGTGAGTACCAAATTTGATATGAGAAGTGATCCTGGTGTTGTAAGGAATTATGGGAAGCTATTGGTGGAGATGGTTTCTATTGTTCCAGATGGAATTGTGTGCTTTTTTGTGAGTTATTCGTACATGGATGGGATTATCAACACCTGGAATGAAAGTGGACTTCTAAAGGAAATAATGCAACATAAGCTTGTCTTTATTGAGACCCAAGATGTGGTAGAAACTACTTTGGCTCTTGACAACTATCGTAGGGCTTGTGATTGTGGGAGAGGTGCTGTTTTTTTCTCTGTTGCCAGGGGAAAAGTAGCTGAAGGAATAGATTTTGATCGGCATTATGGCAGACTAGTGATCATGTTTGGTGTTCCTTTCCAGTACACCTTAAGCAAGATACTACTTGCACGGTTGGAGTATCTAAGGGACACATTTCAGATTAAGGAAGGGGATTTCCTAACATTTGATGCCCTGAGACAAGCTGCTCAATGTGTGGGCCGAGTGATCCGGTCAAAGGCTGATTACGGAATGATGATATTTGCTGACAAAAGGTATAGCCGTCATGACAAGCGCTCTAAATTGCCTGGTTGGATTTTGTCTCATTTACGTGATGCACACCTGAATTTGAGCACTGACATGGCACTGCATATAGCACGCGAGTTTCTTCGGAAGATGGCTCAACCATATGACAAGACTGGTTCTAGCGGTAAGAAAACCCTGTTATCACAAGAAGATTTGGAAAAGATGGATGACAGCGGTAAGCAGGCGATGCTGTATTAA

Protein:   MKFQIEDVTVYFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYTISKPQGAIKLIYCTRTVHEMEKTLAELKLLHNYQVKHLGPAAKILAIGLSSRKNLCVNPNVLEANNRDSVDAACRKRTASWVRALAAENPNVETCEFFENYERAASGAVLPPGVYTLQDLRAYGKEKGWCPYFLARHMVQLANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLDGASRNISRIEQEINRFKATDANRLRDEYKRLVNGLALSGNLPGSDSWLSNPALPDDILREAVPGNIRRAEHFLHVLRRLLQYLTVRLDTENVEKESPISFVASINNQAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHVQTICDFATLVGTYSRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGIVCFFVSYSYMDGIINTWNESGLLKEIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGSSGKKTLLSQEDLEKMDDSGKQAMLY